I believe that it is possible for the creator of nfts to get a percentage of sales so maybe they could create a system that is still profitable for the company and player friendly.

So just like hearthstone dusting? That system lead to rampant power powercreep to ensure that people would still be incenvised to buy new packs and not just coast on the free packs. Though if my memories of yugioh are still relevant powercreep (and very liberal use of banlists) is sort of already baked into the original game.